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  5. Spov3_S07.00035

Spov3_S07.00035 (EMB1080)


Aliases : EMB1080

Description : not classified


Gene families : OG0000065 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_S07.00035
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_218

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr1.01367 AT-HSFA4C, RHA1, HSFA4C not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01966 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02063 LRX9 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02396 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01185 AT-HSFA4C, RHA1, HSFA4C not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02666 AT-HSFA4C, RHA1, HSFA4C not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02852 ROPGEF14, ATROPGEF14 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0000160 phosphorelay signal transduction system IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004673 protein histidine kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0007165 signal transduction IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0035556 intracellular signal transduction IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140299 small molecule sensor activity IEP Spinacia oleracea GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!