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  5. Spov3_C1305.00004

Spov3_C1305.00004 (DOM1, EMB514)


Aliases : DOM1, EMB514

Description : not classified


Gene families : OG0000023 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000023_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_C1305.00004

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0037.00012 IEF not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0037.00016 No alias not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0037.00033 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0058.00009 bHLH60 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0058.00015 SWA1, EDA13, EDA19 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0058.00016 bHLH60 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0058.00020 CBL1, ATCBL1, SCABP5 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0101.00001 CBL1, ATCBL1, SCABP5 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0171.00004 CBL1, ATCBL1, SCABP5 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0345.00004 bHLH60 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0367.00008 CBL1, ATCBL1, SCABP5 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0415.00001 ATIPT4, IPT4 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0516.00005 ATIPT4, IPT4 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0528.00002 ATIPT4, IPT4 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0530.00001 bHLH60 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0536.00004 CBL1, ATCBL1, SCABP5 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0625.00005 SEC24A, ERMO2, AtSEC24A not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0701.00004 ATIPT4, IPT4 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0840.00006 CBL1, ATCBL1, SCABP5 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0898.00003 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0898.00004 NPH4, MSG1,... not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0954.00001 bHLH60 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1055.00005 ATIPT4, IPT4 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1072.00004 NPH4, MSG1,... not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1073.00002 SEC24A, ERMO2, AtSEC24A not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1125.00001 bHLH60 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1286.00001 bHLH60 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1286.00002 SEC24A, ERMO2, AtSEC24A not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1351.00003 WAV3 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1366.00002 CBL1, ATCBL1, SCABP5 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1399.00001 CBL1, ATCBL1, SCABP5 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1581.00001 bHLH60 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04848 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02696 bHLH60 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03158 NASP not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03166 bHLH60 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006417 regulation of translation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010608 post-transcriptional regulation of gene expression IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0017148 negative regulation of translation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030597 RNA glycosylase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030598 rRNA N-glycosylase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034248 regulation of amide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034249 negative regulation of amide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051246 regulation of protein metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051248 negative regulation of protein metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140102 catalytic activity, acting on a rRNA IEP Spinacia oleracea GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!