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  5. Spov3_C0556.00001

Spov3_C0556.00001


Description : not classified


Gene families : OG0001639 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001639_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_C0556.00001
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_183

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0822.00001 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0822.00002 MEF10 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0822.00003 REME1 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008146 sulfotransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015074 DNA integration IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_rpt 77 104
IPR002885 Pentatricopeptide_rpt 327 351
IPR002885 Pentatricopeptide_rpt 49 75
IPR002885 Pentatricopeptide_rpt 290 313
IPR002885 Pentatricopeptide_rpt 177 225
IPR046848 E_motif 371 433
IPR046849 Eplus_motif 441 460
IPR032867 DYW_dom 469 556
No external refs found!