- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : STL1
Description : not classified
Gene families : OG0000029 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000029_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_C0545.00001 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_563 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Spov3_C0037.00001 | IF1 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0037.00038 | RIP1, MORF8 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0224.00004 | BIG2 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0345.00009 | STL1 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0491.00005 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0528.00005 | STL1 | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0623.00002 | STL1 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0625.00008 | No alias | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0660.00004 | STL1 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0684.00002 | BIG2 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0732.00004 | BIG2 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0776.00004 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0861.00001 | STL1 | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0901.00004 | No alias | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0928.00001 | BIG2 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1102.00002 | No alias | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1114.00001 | STL1 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1141.00007 | No alias | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1201.00004 | BIG2 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1236.00002 | BIG2 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1263.00001 | BIG2 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1290.00001 | No alias | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C1351.00001 | BIG2 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.01915 | BIG2 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004514 | nicotinate-nucleotide diphosphorylase (carboxylating) activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009117 | nucleotide metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009435 | NAD biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016763 | pentosyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0019359 | nicotinamide nucleotide biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0019362 | pyridine nucleotide metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0019363 | pyridine nucleotide biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0019637 | organophosphate metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0019674 | NAD metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0046496 | nicotinamide nucleotide metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |