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  5. Spov3_C0367.00001

Spov3_C0367.00001


Description : not classified


Gene families : OG0000028 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000028_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_C0367.00001
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0037.00005 ATCKX3, CKX3 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0037.00008 No alias not classified 0.13 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0037.00013 No alias not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0037.00028 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0058.00022 ATCKX3, CKX3 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0170.00005 No alias not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0224.00005 No alias not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0345.00008 TPR13 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0398.00003 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0514.00007 No alias not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0530.00002 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0594.00006 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0840.00001 No alias not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0857.00005 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1141.00006 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1202.00002 No alias not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1203.00002 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1268.00001 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1275.00001 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1352.00002 No alias not classified 0.13 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1368.00001 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1481.00001 No alias not classified 0.11 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1492.00002 ATCKX3, CKX3 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1639.00001 No alias not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008234 cysteine-type peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0061630 ubiquitin protein ligase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0061659 ubiquitin-like protein ligase activity IEP Spinacia oleracea GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!