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  5. Spov3_C0122.00001

Spov3_C0122.00001 (MTK, ATMTK, MTK1)


Aliases : MTK, ATMTK, MTK1

Description : not classified


Gene families : OG0000009 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000009_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_C0122.00001
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_78

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0040.00001 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0040.00016 ATSFH12, SFH12 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0115.00001 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0115.00003 No alias not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00185 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01221 MTK, ATMTK, MTK1 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.04473 MTK, ATMTK, MTK1 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041373 RT_RNaseH 791 890
IPR000477 RT_dom 544 703
IPR041588 Integrase_H2C2 970 1028
IPR005162 Retrotrans_gag_dom 47 142
IPR001584 Integrase_cat-core 1042 1140
No external refs found!