1. Home
  2. Species
  3. Spinacia oleracea
  4. Sequence
  5. Spov3_C0050.00001

Spov3_C0050.00001 (SEIPIN1)


Aliases : SEIPIN1

Description : not classified


Gene families : OG0000001 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_C0050.00001
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_720

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0002.00209 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0006.00101 UMAMIT9 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0016.00052 PIR121, ATSRA1,... not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0211.00003 AtSAM2, SAM-2, MAT2, SAM2 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02590 DEG2, DEGP2, EMB3117 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02624 AGD15 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04139 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00176 ROXY17, GRXS6 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00268 APUM11, PUM11 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00488 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02244 FUS4, FUS8,... not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02927 MS188, AtMYB103,... not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02458 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02770 WES1, GH3.5 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02957 AGL34 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.03193 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0015399 primary active transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0022804 active transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140359 ABC-type transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 71 145
No external refs found!