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  5. Spov3_C0024.00025

Spov3_C0024.00025


Description : FRS/FRF-type transcription factor


Gene families : OG0000042 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_C0024.00025

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0013.00040 No alias FRS/FRF-type transcription factor 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_S01.00185 anac097, NAC097 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_S12.00055 AFT, AKR2, AKR2A FRS/FRF-type transcription factor 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01576 anac097, NAC097 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01978 anac097, NAC097 not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.03372 No alias FRS/FRF-type transcription factor 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.01747 No alias not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02241 No alias FRS/FRF-type transcription factor 0.11 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02889 No alias FRS/FRF-type transcription factor 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03613 anac097, NAC097 FRS/FRF-type transcription factor 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03709 No alias FRS/FRF-type transcription factor 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04664 bZIP69 FRS/FRF-type transcription factor 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04673 No alias FRS/FRF-type transcription factor 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.05501 bZIP69 FRS/FRF-type transcription factor 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.05667 No alias FRS/FRF-type transcription factor 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00718 anac097, NAC097 FRS/FRF-type transcription factor 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00993 No alias FRS/FRF-type transcription factor 0.14 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01815 No alias FRS/FRF-type transcription factor 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01953 AHA6, HA6 not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02633 No alias FRS/FRF-type transcription factor 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.03569 IDD5, RVN, AtIDD5 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01630 No alias FRS/FRF-type transcription factor 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02320 No alias FRS/FRF-type transcription factor 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02619 No alias FRS/FRF-type transcription factor 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.00660 No alias FRS/FRF-type transcription factor 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.01217 bige1b not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.01616 No alias FRS/FRF-type transcription factor 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02963 anac097, NAC097 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03419 No alias FRS/FRF-type transcription factor 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03559 SLK2 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03904 No alias FRS/FRF-type transcription factor 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.01540 No alias not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02395 anac097, NAC097 FRS/FRF-type transcription factor 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02788 No alias FRS/FRF-type transcription factor 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02867 AFT, AKR2, AKR2A FRS/FRF-type transcription factor 0.12 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004521 RNA endonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004540 RNA nuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006694 steroid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008202 steroid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016125 sterol metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016126 sterol biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019321 pentose metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019566 arabinose metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0031047 regulatory ncRNA-mediated gene silencing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046373 L-arabinose metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901615 organic hydroxy compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 273 367
IPR004330 FAR1_DNA_bnd_dom 65 166
IPR007527 Znf_SWIM 565 586
No external refs found!