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Aliases : MGO3, RPL30, BRU1, TSK
Description : not classified
Gene families : OG0000045 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000045_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_C0008.00041 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_74 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Spov3_C0004.00133 | ORP4A | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0038.00010 | CRK8 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0045.00006 | XI-6, ATMYA2, XI-2, MYA2 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0062.00002 | No alias | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.00715 | SMC2B, ATSMC2 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.02073 | AGO3 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.02991 | PDE340 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.04574 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.00709 | No alias | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.02490 | ATSPX4, SPX4 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.02524 | No alias | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.02858 | No alias | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.02859 | No alias | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.03704 | ACYB-2 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.05335 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.05336 | AGC1-8 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.00582 | No alias | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.01370 | SMC2B, ATSMC2 | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.02746 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.03767 | BGLU42 | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.04371 | RPSL2 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.01011 | OBAP1a | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.02217 | XI-6, ATMYA2, XI-2, MYA2 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.02218 | No alias | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.02924 | MGO3, RPL30, BRU1, TSK | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006528 | asparagine metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006529 | asparagine biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006869 | lipid transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0015850 | organic hydroxy compound transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0015918 | sterol transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0032365 | intracellular lipid transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0032366 | intracellular sterol transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0046907 | intracellular transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051641 | cellular localization | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051649 | establishment of localization in cell | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0071702 | organic substance transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013103 | RVT_2 | 3 | 58 |
| No external refs found! |