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  5. Spov3_C0006.00076

Spov3_C0006.00076 (AtcPT6, cPT6)


Aliases : AtcPT6, cPT6

Description : not classified


Gene families : OG0000096 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000096_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_C0006.00076

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0002.00145 EMB3120 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0012.00057 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0083.00002 AtcPT6, cPT6 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01690 SIKIC1 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04562 AtcPT6, cPT6 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04892 PDP3 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04895 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02410 AtcPT6, cPT6 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01263 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02990 AtcPT6, cPT6 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004252 Probable_transposase_24 579 663
No external refs found!