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  5. Spov3_C0003.00132

Spov3_C0003.00132


Description : not classified


Gene families : OG0000031 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000031_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_C0003.00132

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0001.00109 FL7 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0004.00177 No alias not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0024.00004 LAC11 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0030.00041 ATHXK4, HKL2 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0250.00001 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0606.00001 GORK not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_S01.00178 LAC11 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_S01.00211 FL7 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.00787 PDCB5 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01082 No alias not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01952 ATGCP3, GCP3,... not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02733 MAP1D not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02964 BAT5, BASS5 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02589 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02627 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04950 AGO7, ZIP not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.05540 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01211 PHT4;5 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01270 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02467 No alias not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.03074 No alias not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.03759 bHLH096, bHLH96 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.00139 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.00653 ATNRT2.7, NRT2.7 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01098 SMAX1 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01363 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.01950 ARPF2 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02630 ROPGEF5, ATROPGEF5 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02709 ROPGEF5, ATROPGEF5 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03006 AT-HSP17.6A,... not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03397 bHLH096, bHLH96 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03597 GTE7 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.03148 GTE7 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005811 lipid droplet IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009889 regulation of biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0012511 monolayer-surrounded lipid storage body IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0031323 regulation of cellular metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0060255 regulation of macromolecule metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0080090 regulation of primary metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!