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  5. Spov3_C0003.00112

Spov3_C0003.00112


Description : not classified


Gene families : OG0000001 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_C0003.00112

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0005.00040 AtAVT3 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0038.00017 PrimPol not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_S01.00070 SDN3 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02193 No alias not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.03115 No alias not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03545 APUM11, PUM11 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04549 REM1 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01950 SAR1, NUP160, ATNUP160 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.03031 No alias not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0005984 disaccharide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0005991 trehalose metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0005992 trehalose biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009311 oligosaccharide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009312 oligosaccharide biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016051 carbohydrate biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016462 pyrophosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046351 disaccharide biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 138 231
No external refs found!