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  5. Spov3_C0001.00087

Spov3_C0001.00087


Description : not classified


Gene families : OG0000058 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000058_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_C0001.00087
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0010.00002 UGT76E11 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0026.00011 No alias not classified 0.12 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0057.00011 AtcPT6, cPT6 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_S01.00056 UGT76E11 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_S05.00040 No alias not classified 0.12 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_S12.00022 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01009 ATR1, AR1, AtCPR1 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03115 IRR not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04449 MadA3 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.00246 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01133 CPFTSZ, FTSZ1-1,... not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02085 UGT76E11 not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.03180 UGT76E11 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02357 SYN4, ATRAD21.3 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.01783 No alias not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03344 No alias not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006265 DNA topological change IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006835 dicarboxylic acid transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009767 photosynthetic electron transport chain IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015711 organic anion transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015740 C4-dicarboxylate transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015743 malate transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015849 organic acid transport IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015930 glutamate synthase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016168 chlorophyll binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019684 photosynthesis, light reaction IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0022900 electron transport chain IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046942 carboxylic acid transport IEP Spinacia oleracea GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!