Lsat_1_v5_gn_9_55760.1 (ATG6, AtBECLIN1,...)

Aliases : ATG6, AtBECLIN1, ATATG6, BECLIN1

Description : not classified

Gene families : OG0001729 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001729_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_55760.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_149

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004527	exonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008408	3'-5' exonuclease activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004097	catechol oxidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004609	phosphatidylserine decarboxylase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004672	protein kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006468	protein phosphorylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006644	phospholipid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006793	phosphorus metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006811	monoatomic ion transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006812	monoatomic cation transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006813	potassium ion transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0008610	lipid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0008654	phospholipid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009058	biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016301	kinase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016310	phosphorylation	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016829	lyase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016830	carbon-carbon lyase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016831	carboxy-lyase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019637	organophosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0030001	metal ion transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0036211	protein modification process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043412	macromolecule modification	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044255	cellular lipid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0071805	potassium ion transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0090407	organophosphate biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:1901702	salt transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002562	3'-5'_exonuclease_dom	55	206

External Links

No external refs found!

Lsat_1_v5_gn_9_55760.1 (ATG6, AtBECLIN1,...)

Expression Profile

Co-expression Networks

Functional Annotation