Lsat_1_v5_gn_9_54860.1 (CBF4, DREB1D)

Aliases : CBF4, DREB1D

Description : transcription factor *(CBF/DREB1). subgroup ERF-III transcription factor

Gene families : OG0000813 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000813_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_54860.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_616

Target	Alias	Description	ECC score	Gene Family Method	Actions
Lsat_1_v5_gn_9_53960.1	DREB1C, CBF2,...	transcription factor *(CBF/DREB1). subgroup ERF-III...	0.01	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_9_54101.1	CBF1, DREB1B, ATCBF1	subgroup ERF-III transcription factor. transcription...	0.04	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0009719	response to endogenous stimulus	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009725	response to hormone	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009733	response to auxin	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010033	response to organic substance	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042221	response to chemical	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0050896	response to stimulus	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	65	115

External Links

No external refs found!