Lsat_1_v5_gn_9_54780.1 (DREB1C, CBF2, ATCBF2, FTQ4)

Aliases : DREB1C, CBF2, ATCBF2, FTQ4

Description : subgroup ERF-III transcription factor. transcription factor *(CBF/DREB1)

Gene families : OG0000813 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000813_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_54780.1

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003729	mRNA binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004252	serine-type endopeptidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004402	histone acetyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005685	U1 snRNP	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006376	mRNA splice site recognition	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006473	protein acetylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006475	internal protein amino acid acetylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006811	monoatomic ion transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006812	monoatomic cation transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008080	N-acetyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008113	peptide-methionine (S)-S-oxide reductase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016407	acetyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016410	N-acyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016570	histone modification	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016573	histone acetylation	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0018205	peptidyl-lysine modification	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0018393	internal peptidyl-lysine acetylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0018394	peptidyl-lysine acetylation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0022618	protein-RNA complex assembly	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0030001	metal ion transport	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0035556	intracellular signal transduction	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0043543	protein acylation	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0048364	root development	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0048367	shoot system development	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0048731	system development	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0071826	protein-RNA complex organization	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0097525	spliceosomal snRNP complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0099402	plant organ development	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0120114	Sm-like protein family complex	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140993	histone modifying activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:1990904	ribonucleoprotein complex	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	55	105

External Links

No external refs found!

Lsat_1_v5_gn_9_54780.1 (DREB1C, CBF2, ATCBF2, FTQ4)

Expression Profile

Co-expression Networks

Functional Annotation