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  5. Lsat_1_v5_gn_9_46040.1

Lsat_1_v5_gn_9_46040.1


Description : component *(U11-48K) of U11 snRNP complex


Gene families : OG0034767 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_46040.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_207


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0000786 nucleosome IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004652 obsolete polynucleotide adenylyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007062 sister chromatid cohesion IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007064 mitotic sister chromatid cohesion IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009894 regulation of catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0022402 cell cycle process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0032993 protein-DNA complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042176 regulation of protein catabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043631 obsolete RNA polyadenylation IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1905368 peptidase complex IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:1905369 endopeptidase complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR022776 TRM13/UPF0224_CHHC_Znf_dom 83 106
No external refs found!