Lsat_1_v5_gn_9_36500.1

Description : not classified

Gene families : OG0000168 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000168_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_36500.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_12

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0044183	protein folding chaperone	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:0140662	ATP-dependent protein folding chaperone	IEA	Interproscan
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000009	alpha-1,6-mannosyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0000030	mannosyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004376	glycolipid mannosyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005543	phospholipid binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008289	lipid binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016192	vesicle-mediated transport	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0016459	myosin complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0030117	membrane coat	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0030118	clathrin coat	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0030125	clathrin vesicle coat	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0030132	clathrin coat of coated pit	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0030246	carbohydrate binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0030247	polysaccharide binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0030976	thiamine pyrophosphate binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046907	intracellular transport	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0050997	quaternary ammonium group binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051641	cellular localization	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051649	establishment of localization in cell	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR013126	Hsp_70_fam	363	576
IPR013126	Hsp_70_fam	10	359

External Links

No external refs found!

Lsat_1_v5_gn_9_36500.1

Expression Profile

Co-expression Networks

Functional Annotation