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  5. Lsat_1_v5_gn_9_27960.1

Lsat_1_v5_gn_9_27960.1


Description : not classified


Gene families : OG0009011 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_27960.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_142


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0001510 RNA methylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003674 molecular_function IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004743 pyruvate kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005096 GTPase activator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005488 binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006811 monoatomic ion transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006812 monoatomic cation transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006813 potassium ion transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008047 enzyme activator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008168 methyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008483 transaminase activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0009654 photosystem II oxygen evolving complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010024 phytochromobilin biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015079 potassium ion transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015299 obsolete solute:proton antiporter activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0016020 membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016556 mRNA modification IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0019898 extrinsic component of membrane IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030955 potassium ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0031420 alkali metal ion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033013 tetrapyrrole metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033014 tetrapyrrole biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043484 regulation of RNA splicing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043648 dicarboxylic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050684 regulation of mRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0050897 cobalt ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0051020 GTPase binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051202 phytochromobilin metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071805 potassium ion transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0080009 mRNA methylation IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0140673 transcription elongation-coupled chromatin remodeling IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1903311 regulation of mRNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR012945 Tubulin-bd_cofactor_C_dom 338 450
No external refs found!