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  5. Lsat_1_v5_gn_9_17620.1

Lsat_1_v5_gn_9_17620.1 (ATGLR1.3, GLR1.3)


Aliases : ATGLR1.3, GLR1.3

Description : ligand-gated cation channel *(GLR)


Gene families : OG0000349 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000349_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_17620.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_35


Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated monoatomic ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004674 protein serine/threonine kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005488 binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt_C 598 691
IPR001638 Solute-binding_3/MltF_N 948 1254
IPR001828 ANF_lig-bd_rcpt 88 419
IPR001320 Iontro_rcpt_C 1255 1286
IPR001638 Solute-binding_3/MltF_N 504 807
No external refs found!