Lsat_1_v5_gn_9_16601.1 (ATGLR1.3, GLR1.3)

Aliases : ATGLR1.3, GLR1.3

Description : ligand-gated cation channel *(GLR)

Gene families : OG0000349 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000349_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_16601.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_135

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022839	monoatomic ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004097	catechol oxidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004619	phosphoglycerate mutase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006006	glucose metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006007	glucose catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008270	zinc ion binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019320	hexose catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0030145	manganese ion binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0043167	ion binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0043169	cation binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044282	small molecule catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046365	monosaccharide catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0046872	metal ion binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0046914	transition metal ion binding	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001828	ANF_lig-bd_rcpt	53	384
IPR001320	Iontro_rcpt_C	774	806
IPR001638	Solute-binding_3/MltF_N	470	773

External Links

No external refs found!