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  5. Lsat_1_v5_gn_9_118160.1

Lsat_1_v5_gn_9_118160.1 (NDC80)


Aliases : NDC80

Description : component *(NDC80) of NDC80 outer kinetochore complex


Gene families : OG0000655 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_118160.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_149


Type GO Term Name Evidence Source
CC GO:0031262 Ndc80 complex IEA Interproscan
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003993 acid phosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004097 catechol oxidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004650 polygalacturonase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006413 translational initiation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009262 deoxyribonucleotide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016791 phosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019843 rRNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030976 thiamine pyrophosphate binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0050997 quaternary ammonium group binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901681 sulfur compound binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005550 Kinetochore_Ndc80 69 179
No external refs found!