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  5. Lsat_1_v5_gn_9_104740.1

Lsat_1_v5_gn_9_104740.1 (LHCB2, LHCB2.2)


Aliases : LHCB2, LHCB2.2

Description : component *(LHCb1/2/3) of LHC-II complex


Gene families : OG0002387 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_9_104740.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_9_104700.1 LHCB2, LHCB2.2 component *(LHCb1/2/3) of LHC-II complex 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_9_104780.1 LHCB2, LHCB2.2 component *(LHCb1/2/3) of LHC-II complex 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015267 channel activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0022803 passive transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 66 231
No external refs found!