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Aliases : HIT1, VPS53, ATVPS53
Description : component *(VPS53/HIT1) of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes
Gene families : OG0005091 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0005091_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_87740.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_250 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000154 | rRNA modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0001510 | RNA methylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004175 | endopeptidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005102 | signaling receptor binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008083 | growth factor activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008168 | methyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0008283 | cell population proliferation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016436 | rRNA (uridine) methyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0030545 | signaling receptor regulator activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0030546 | signaling receptor activator activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0031167 | rRNA methylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0032259 | methylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0044183 | protein folding chaperone | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0046983 | protein dimerization activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0048018 | receptor ligand activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0070042 | rRNA (uridine-N3-)-methyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0070475 | rRNA base methylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | Lactuca Sativa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007234 | Vps53_N | 3 | 171 |
| No external refs found! |