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  5. Lsat_1_v5_gn_8_65840.1

Lsat_1_v5_gn_8_65840.1 (ATL13)


Aliases : ATL13

Description : RING-H2-class ATL-subclass E3 ubiquitin ligase


Gene families : OG0042736 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_65840.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_74


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004506 squalene monooxygenase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030246 carbohydrate binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001841 Znf_RING 127 170
No external refs found!