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Description : effector receptor *(NLR)
Gene families : OG0000044 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000044_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_47001.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_11 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Lsat_1_v5_gn_8_47121.1 | No alias | effector receptor *(NLR) | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Lsat_1_v5_gn_8_47141.1 | DM2h | effector receptor *(NLR) | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Lsat_1_v5_gn_8_49961.1 | No alias | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0007165 | signal transduction | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004420 | hydroxymethylglutaryl-CoA reductase (NADPH) activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0004869 | cysteine-type endopeptidase inhibitor activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005509 | calcium ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006952 | defense response | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008483 | transaminase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0015936 | coenzyme A metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019842 | vitamin binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0036094 | small molecule binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0043168 | anion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0070279 | vitamin B6 binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000157 | TIR_dom | 19 | 152 |
| No external refs found! |