Lsat_1_v5_gn_8_39840.1 (XYL1, GH31, TRG1, ATXYL1, AXY3)

Aliases : XYL1, GH31, TRG1, ATXYL1, AXY3

Description : EC_3.2 glycosylase. 1,6-alpha-xylosidase *(AXYL1/2)

Gene families : OG0003166 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003166_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_39840.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_74

Target	Alias	Description	ECC score	Gene Family Method	Actions
Bra004319	XYL1, GH31,...	1,6-alpha-xylosidase *(AXYL1/2). EC_3.2 glycosylase	0.01	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004560	alpha-L-fucosidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004650	polygalacturonase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004857	enzyme inhibitor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005515	protein binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015928	fucosidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0030246	carbohydrate binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0030976	thiamine pyrophosphate binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0050997	quaternary ammonium group binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140678	molecular function inhibitor activity	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000322	Glyco_hydro_31_TIM	282	773
IPR025887	Glyco_hydro_31_N_dom	193	261

External Links

No external refs found!