Lsat_1_v5_gn_8_143621.1 (ATRABG3E, ATRAB7, RABG3E)

Aliases : ATRABG3E, ATRAB7, RABG3E

Description : not classified

Gene families : OG0000489 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000489_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_143621.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_149

Target	Alias	Description	ECC score	Gene Family Method	Actions
Lsat_1_v5_gn_4_42600.1	CRCK1	EC_2.7 transferase transferring phosphorus-containing group	0.02	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_9_59821.1	STE24, ATSTE24	not classified	0.01	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004645	1,4-alpha-oligoglucan phosphorylase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0008184	glycogen phosphorylase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0009579	thylakoid	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010257	NADH dehydrogenase complex assembly	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010258	NADH dehydrogenase complex (plastoquinone) assembly	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010275	NAD(P)H dehydrogenase complex assembly	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0032392	DNA geometric change	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0032508	DNA duplex unwinding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0040008	regulation of growth	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0045927	positive regulation of growth	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0071805	potassium ion transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	4	40

External Links

No external refs found!