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  5. Lsat_1_v5_gn_8_140561.1

Lsat_1_v5_gn_8_140561.1 (AtRLP22, RLP22)


Aliases : AtRLP22, RLP22

Description : not classified


Gene families : OG0000056 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_140561.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_176

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_3_16961.1 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_3_16981.1 RLP37, EMB2800, AtRLP37 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_4_85660.1 EMS1, EXS not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_5_42060.1 PXL2, MIK1 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_8_138300.1 No alias not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_8_139460.1 CLV2, AtRLP10 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_8_140821.1 EMS1, EXS not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_8_158040.1 AtRLP52, RLP52 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004860 protein kinase inhibitor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019207 kinase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019210 kinase inhibitor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019887 protein kinase regulator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032182 ubiquitin-like protein binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0034061 DNA polymerase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043130 ubiquitin binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051726 regulation of cell cycle IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0070001 aspartic-type peptidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 39 76
IPR001611 Leu-rich_rpt 628 687
IPR001611 Leu-rich_rpt 312 376
IPR001611 Leu-rich_rpt 162 217
IPR001611 Leu-rich_rpt 506 565
IPR001611 Leu-rich_rpt 578 591
IPR001611 Leu-rich_rpt 732 753
IPR001611 Leu-rich_rpt 854 875
No external refs found!