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  5. Lsat_1_v5_gn_8_139460.1

Lsat_1_v5_gn_8_139460.1 (CLV2, AtRLP10)


Aliases : CLV2, AtRLP10

Description : not classified


Gene families : OG0000056 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_139460.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_108

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_8_132621.1 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_8_140561.1 AtRLP22, RLP22 not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008037 cell recognition IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031090 organelle membrane IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031968 organelle outer membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048544 recognition of pollen IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 565 581
IPR001611 Leu-rich_rpt 492 549
IPR001611 Leu-rich_rpt 147 204
IPR001611 Leu-rich_rpt 327 382
IPR001611 Leu-rich_rpt 922 980
IPR013210 LRR_N_plant-typ 38 75
No external refs found!