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  5. Lsat_1_v5_gn_8_132761.1

Lsat_1_v5_gn_8_132761.1 (ATEXPB1, EXPB1,...)


Aliases : ATEXPB1, EXPB1, ATHEXP BETA 1.5

Description : beta-class expansin


Gene families : OG0042073 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_132761.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_74


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004560 alpha-L-fucosidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004857 enzyme inhibitor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015928 fucosidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030246 carbohydrate binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140359 ABC-type transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140678 molecular function inhibitor activity IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 83 163
IPR007117 Expansin_CBD 175 256
No external refs found!