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  5. Lsat_1_v5_gn_8_114481.1

Lsat_1_v5_gn_8_114481.1 (TN10, AtTN10, TIR)


Aliases : TN10, AtTN10, TIR

Description : effector receptor *(NLR)


Gene families : OG0000573 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000573_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_8_114481.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_212

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_8_112841.1 TN10, AtTN10, TIR effector receptor *(NLR) 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000157 TIR_dom 17 192
IPR002182 NB-ARC 207 440
IPR045344 C-JID 989 1114
No external refs found!