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  5. Lsat_1_v5_gn_7_78601.1

Lsat_1_v5_gn_7_78601.1 (CNGC2, DND1, ATCNGC2)


Aliases : CNGC2, DND1, ATCNGC2

Description : cyclic nucleotide-gated cation channel *(CNGC). temperature sensor protein *(CNGC2)


Gene families : OG0032632 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_78601.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_148


Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006352 DNA-templated transcription initiation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008519 ammonium transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016859 cis-trans isomerase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019842 vitamin binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030170 pyridoxal phosphate binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0070279 vitamin B6 binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072488 ammonium transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0098662 inorganic cation transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 104 426
IPR000595 cNMP-bd_dom 528 612
No external refs found!