Lsat_1_v5_gn_7_62560.1 (HERK1)

Aliases : HERK1

Description : CrlRLK1 protein kinase. EC_2.7 transferase transferring phosphorus-containing group. RALF-peptide receptor *(CrRLK1L)

Gene families : OG0000975 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000975_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_62560.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_201

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004061	arylformamidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004420	hydroxymethylglutaryl-CoA reductase (NADPH) activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004497	monooxygenase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004867	serine-type endopeptidase inhibitor activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005506	iron ion binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006355	regulation of DNA-templated transcription	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006568	tryptophan metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006569	tryptophan catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006576	biogenic amine metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006586	indolalkylamine metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0008037	cell recognition	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009063	amino acid catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009074	aromatic amino acid family catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009611	response to wounding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009889	regulation of biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0010333	terpene synthase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010468	regulation of gene expression	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015936	coenzyme A metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016054	organic acid catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016491	oxidoreductase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016726	oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016829	lyase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016846	carbon-sulfur lyase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019222	regulation of metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019441	tryptophan catabolic process to kynurenine	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0020037	heme binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0022804	active transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0031323	regulation of cellular metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042180	cellular ketone metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042430	indole-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042436	indole-containing compound catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0042537	benzene-containing compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0043169	cation binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044282	small molecule catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046395	carboxylic acid catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046490	isopentenyl diphosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0046872	metal ion binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0046906	tetrapyrrole binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0046914	transition metal ion binding	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0048544	recognition of pollen	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0050794	regulation of cellular process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0050992	dimethylallyl diphosphate biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0050993	dimethylallyl diphosphate metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0051252	regulation of RNA metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0051745	4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0070189	kynurenine metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0080090	regulation of primary metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140110	transcription regulator activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140359	ABC-type transporter activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901606	alpha-amino acid catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	402	642
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	33	301

External Links

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Lsat_1_v5_gn_7_62560.1 (HERK1)

Expression Profile

Co-expression Networks

Functional Annotation