Lsat_1_v5_gn_7_55280.1 (ATWRKY17, WRKY17)

Aliases : ATWRKY17, WRKY17

Description : WRKY-type transcription factor

Gene families : OG0031941 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_55280.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_176

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005667	transcription regulator complex	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005672	transcription factor TFIIA complex	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006352	DNA-templated transcription initiation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006367	transcription initiation at RNA polymerase II promoter	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0022834	ligand-gated channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0022836	gated channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0022839	monoatomic ion gated channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	205	261

External Links

No external refs found!

Lsat_1_v5_gn_7_55280.1 (ATWRKY17, WRKY17)

Expression Profile

Co-expression Networks

Functional Annotation