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  5. Lsat_1_v5_gn_7_49960.1

Lsat_1_v5_gn_7_49960.1


Description : not classified


Gene families : OG0008310 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_49960.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_144


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0003006 developmental process involved in reproduction IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004497 monooxygenase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005199 structural constituent of cell wall IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005506 iron ion binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005509 calcium ion binding IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005666 RNA polymerase III complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006351 DNA-templated transcription IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006383 transcription by RNA polymerase III IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008037 cell recognition IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008194 UDP-glycosyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009664 plant-type cell wall organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009790 embryo development IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009793 embryo development ending in seed dormancy IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009889 regulation of biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0022414 reproductive process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030880 RNA polymerase complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031323 regulation of cellular metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043565 sequence-specific DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048544 recognition of pollen IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0050660 flavin adenine dinucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0060255 regulation of macromolecule metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0080090 regulation of primary metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR012881 DUF1685 62 107
No external refs found!