Lsat_1_v5_gn_7_37961.1 (VLN3, ATVLN3)

Aliases : VLN3, ATVLN3

Description : villin actin-crosslinking factor

Gene families : OG0000562 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000562_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_37961.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_45

Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005543	phospholipid binding	None	Extended
MF	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006887	exocytosis	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008289	lipid binding	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0032940	secretion by cell	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0035091	phosphatidylinositol binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0046903	secretion	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0099023	vesicle tethering complex	None	Extended
BP	GO:0140352	export from cell	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
MF	GO:1901981	phosphatidylinositol phosphate binding	None	Extended
MF	GO:1902936	phosphatidylinositol bisphosphate binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004784	superoxide dismutase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006801	superoxide metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016409	palmitoyltransferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016721	oxidoreductase activity, acting on superoxide radicals as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR046364	Exo70_C	36	96
IPR005100	NGN-domain	410	447
IPR007123	Gelsolin-like_dom	466	515
IPR003165	Piwi	209	265

External Links

No external refs found!