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  5. Lsat_1_v5_gn_7_20121.1

Lsat_1_v5_gn_7_20121.1 (RK3, ARK3)


Aliases : RK3, ARK3

Description : not classified


Gene families : OG0002266 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002266_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_20121.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_7_18821.1 RK3, ARK3 SD-1 protein kinase. EC_2.7 transferase transferring... 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
BP GO:0048544 recognition of pollen IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004784 superoxide dismutase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006260 DNA replication IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006801 superoxide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0017004 cytochrome complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072593 reactive oxygen species metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001480 Bulb-type_lectin_dom 75 180
IPR003609 Pan_app 342 409
IPR000858 S_locus_glycoprot_dom 214 321
No external refs found!