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  5. Lsat_1_v5_gn_7_113520.1

Lsat_1_v5_gn_7_113520.1 (ATFIM1, FIM1)


Aliases : ATFIM1, FIM1

Description : fimbrin actin-crosslinking factor


Gene families : OG0000966 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000966_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_113520.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_58


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004602 glutathione peroxidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005509 calcium ion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0017003 protein-heme linkage IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0017004 cytochrome complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0017006 protein-tetrapyrrole linkage IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019843 rRNA binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0065003 protein-containing complex assembly IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001715 CH_dom 194 294
IPR001715 CH_dom 322 422
IPR001715 CH_dom 444 545
IPR001715 CH_dom 51 163
No external refs found!