Lsat_1_v5_gn_7_110600.1

Description : not classified

Gene families : OG0001944 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001944_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_110600.1

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005216	monoatomic ion channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0022834	ligand-gated channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0022836	gated channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0022839	monoatomic ion gated channel activity	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_rpt	485	511
IPR002885	Pentatricopeptide_rpt	790	811
IPR002885	Pentatricopeptide_rpt	513	541
IPR002885	Pentatricopeptide_rpt	109	138
IPR002885	Pentatricopeptide_rpt	311	337
IPR002885	Pentatricopeptide_rpt	283	307
IPR002885	Pentatricopeptide_rpt	80	106
IPR046848	E_motif	830	892
IPR032867	DYW_dom	928	1020
IPR002885	Pentatricopeptide_rpt	409	457
IPR002885	Pentatricopeptide_rpt	714	760
IPR002885	Pentatricopeptide_rpt	207	254

External Links

No external refs found!