- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : BIP1
Description : not classified
Gene families : OG0005125 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0005125_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_7_104101.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_166 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Lsat_1_v5_gn_2_127860.1 | BIP1 | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Lsat_1_v5_gn_2_69941.1 | BIP1 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004126 | cytidine deaminase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005515 | protein binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006213 | pyrimidine nucleoside metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006216 | cytidine catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006479 | protein methylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0008213 | protein alkylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008270 | zinc ion binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009116 | nucleoside metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009119 | ribonucleoside metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009164 | nucleoside catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009972 | cytidine deamination | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016570 | histone modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016571 | histone methylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0018024 | obsolete histone lysine N-methyltransferase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0019239 | deaminase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0032259 | methylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034656 | nucleobase-containing small molecule catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034968 | histone lysine methylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0042454 | ribonucleoside catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0043414 | macromolecule methylation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0044248 | cellular catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0044282 | small molecule catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046087 | cytidine metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046131 | pyrimidine ribonucleoside metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046133 | pyrimidine ribonucleoside catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046135 | pyrimidine nucleoside catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0072529 | pyrimidine-containing compound catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:1901658 | glycosyl compound catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |