Lsat_1_v5_gn_6_52801.1 (U1SNRNP, U1-70K)


Aliases : U1SNRNP, U1-70K

Description : not classified


Gene families : OG0001666 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001666_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_52801.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_166


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005488 binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006351 DNA-templated transcription IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016779 nucleotidyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016887 ATP hydrolysis activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0030127 COPII vesicle coat IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0031072 heat shock protein binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0034062 5'-3' RNA polymerase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097747 RNA polymerase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR022023 U1snRNP70_N 51 112
No external refs found!