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  5. Lsat_1_v5_gn_6_52280.1

Lsat_1_v5_gn_6_52280.1 (RH37)


Aliases : RH37

Description : sRNA cargo-loading helicase *(RH11/37) of extracellular vesicle trafficking. substrate(PAL) adaptor of SCF E3 ubiquitin ligase *(SAGL1)


Gene families : OG0001305 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001305_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_52280.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_237


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003916 DNA topoisomerase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004518 nuclease activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004527 exonuclease activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005643 nuclear pore IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006265 DNA topological change IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006606 protein import into nucleus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006913 nucleocytoplasmic transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010921 regulation of phosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016410 N-acyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019107 myristoyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019220 regulation of phosphate metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019902 phosphatase binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019903 protein phosphatase binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0031399 regulation of protein modification process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033365 protein localization to organelle IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0034504 protein localization to nucleus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0035303 regulation of dephosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0035304 regulation of protein dephosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050790 regulation of catalytic activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051169 nuclear transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051170 import into nucleus IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051174 regulation of phosphorus metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051246 regulation of protein metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051336 regulation of hydrolase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0065009 regulation of molecular function IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0072594 establishment of protein localization to organelle IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 187 368
IPR006652 Kelch_1 743 789
IPR001650 Helicase_C 403 518
No external refs found!