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  5. Lsat_1_v5_gn_6_4040.1

Lsat_1_v5_gn_6_4040.1


Description : regulatory protein of RNA homeostasis


Gene families : OG0038962 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_4040.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_92


Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005216 monoatomic ion channel activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0005783 endoplasmic reticulum IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006354 DNA-templated transcription elongation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006368 transcription elongation by RNA polymerase II IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006873 intracellular monoatomic ion homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006874 intracellular calcium ion homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0008023 transcription elongation factor complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008374 O-acyltransferase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016570 histone modification IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0016593 Cdc73/Paf1 complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019725 cellular homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030003 intracellular monoatomic cation homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032469 endoplasmic reticulum calcium ion homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042592 homeostatic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048878 chemical homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050801 monoatomic ion homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055074 calcium ion homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055080 monoatomic cation homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0055082 intracellular chemical homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0098771 inorganic ion homeostasis IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 7 32
No external refs found!