Lsat_1_v5_gn_6_37921.1 (U11/U12-65K)

Aliases : U11/U12-65K

Description : component *(U11/U12-65K) of U11/U12 snRNP complex

Gene families : OG0000568 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000568_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_37921.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_92

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0009982	pseudouridine synthase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016866	intramolecular transferase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	370	442
IPR000504	RRM_dom	41	106

External Links

No external refs found!