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  5. Lsat_1_v5_gn_6_33321.1

Lsat_1_v5_gn_6_33321.1 (RBGD1)


Aliases : RBGD1

Description : mono-/sesquiterpene-/diterpene synthase. EC_4.2 carbon-oxygen lyase


Gene families : OG0000493 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000493_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_33321.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_376


Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006497 protein lipidation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006505 GPI anchor metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006506 GPI anchor biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006643 membrane lipid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006644 phospholipid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006650 glycerophospholipid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006664 glycolipid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008654 phospholipid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009247 glycolipid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016830 carbon-carbon lyase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0019842 vitamin binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030170 pyridoxal phosphate binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0045017 glycerolipid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046467 membrane lipid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046474 glycerophospholipid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046486 glycerolipid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046488 phosphatidylinositol metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0070279 vitamin B6 binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1903509 liposaccharide metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 276 387
IPR000504 RRM_dom 446 513
IPR000504 RRM_dom 536 587
IPR001906 Terpene_synth_N 11 179
No external refs found!