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  5. Lsat_1_v5_gn_6_12340.1

Lsat_1_v5_gn_6_12340.1 (AtGH9C3, GH9C3)


Aliases : AtGH9C3, GH9C3

Description : class-C endo-1,4-beta-glucanase


Gene families : OG0017321 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_12340.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_74


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006013 mannose metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0007049 cell cycle IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015923 mannosidase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0022414 reproductive process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051321 meiotic cell cycle IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 22 481
IPR019028 CBM_49 523 602
No external refs found!