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  5. Lsat_1_v5_gn_6_113080.1

Lsat_1_v5_gn_6_113080.1 (PUM14, APUM14)


Aliases : PUM14, APUM14

Description : not classified


Gene families : OG0039391 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_6_113080.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_11


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006766 vitamin metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006767 water-soluble vitamin metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006771 riboflavin metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009110 vitamin biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0009231 riboflavin biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016160 amylase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0020037 heme binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042726 flavin-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0042727 flavin-containing compound biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046906 tetrapyrrole binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 459 493
IPR001313 Pumilio_RNA-bd_rpt 387 421
IPR001313 Pumilio_RNA-bd_rpt 276 305
IPR001313 Pumilio_RNA-bd_rpt 354 384
IPR001313 Pumilio_RNA-bd_rpt 314 341
IPR001313 Pumilio_RNA-bd_rpt 425 441
IPR001313 Pumilio_RNA-bd_rpt 239 273
No external refs found!