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  5. Lsat_1_v5_gn_5_84801.1

Lsat_1_v5_gn_5_84801.1


Description : cell wall glycoprotein


Gene families : OG0005596 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0005596_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_84801.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_267

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_5_84781.1 PAD3, CYP71B15 cell wall glycoprotein 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019321 pentose metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0019566 arabinose metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0030198 extracellular matrix organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043062 extracellular structure organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0046373 L-arabinose metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Lactuca Sativa GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!