Lsat_1_v5_gn_5_62060.1 (WRKY18, ATWRKY18)

Aliases : WRKY18, ATWRKY18

Description : WRKY-type transcription factor

Gene families : OG0045671 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_5_62060.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_59

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0003997	acyl-CoA oxidase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0004356	glutamine synthetase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0005509	calcium ion binding	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0005777	peroxisome	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006541	glutamine metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006542	glutamine biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006629	lipid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0006635	fatty acid beta-oxidation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009062	fatty acid catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010035	response to inorganic substance	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0010167	response to nitrate	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015698	inorganic anion transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0015706	nitrate transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016042	lipid catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0016054	organic acid catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016211	ammonia ligase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	Lactuca Sativa GO terms from Neighborhoods
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0019395	fatty acid oxidation	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0030258	lipid modification	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0034440	lipid oxidation	IEP	Lactuca Sativa GO terms from Neighborhoods
CC	GO:0042579	microbody	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044242	cellular lipid catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044248	cellular catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0044282	small molecule catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0046395	carboxylic acid catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0098661	inorganic anion transmembrane transport	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901698	response to nitrogen compound	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1901700	response to oxygen-containing compound	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1902025	nitrate import	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:1902074	response to salt	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	122	180

External Links

No external refs found!

Lsat_1_v5_gn_5_62060.1 (WRKY18, ATWRKY18)

Expression Profile

Co-expression Networks

Functional Annotation